Package: thekidsbiostats 1.9.1

Matt Cooper

thekidsbiostats: Report Templates and general use functions - The Kids Research Institute Australia, Biostatistics Team

This package includes RMarkdown and ioslides templates that incorporate the The Kid's style guide and emulate the Institutes Web theme. Currently, templates are available to produce stand-alone HTML reports and ioslides presentations. These templates also include colour palates that will automatically reproduce The Kids style in R graphics. A number of helper functions and data-sets are also available. Currently, this is in transition from previous branding to new branding, with added functionality.

Authors:Matt Cooper [aut, cre], Zac Dempsey [aut], Wesley Billingham [aut], Robin van de Meeberg [aut]

thekidsbiostats_1.9.1.tar.gz
thekidsbiostats_1.9.1.zip(r-4.7-any)thekidsbiostats_1.9.1.zip(r-4.6-any)thekidsbiostats_1.9.1.zip(r-4.5-any)
thekidsbiostats_1.9.1.tgz(r-4.6-any)thekidsbiostats_1.9.1.tgz(r-4.5-any)
thekidsbiostats_1.9.1.tar.gz(r-4.7-any)thekidsbiostats_1.9.1.tar.gz(r-4.6-any)
thekidsbiostats_1.9.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
thekidsbiostats/json (API)

# Install 'thekidsbiostats' in R:
install.packages('thekidsbiostats', repos = c('https://the-kids-biostats.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/the-kids-biostats/thekidsbiostats/issues

Pkgdown/docs site:https://the-kids-biostats.github.io

Datasets:

On CRAN:

Conda:

addinsr-studioreproducibilitystatistics

6.39 score 3 stars 36 scripts 31 exports 154 dependencies

Last updated from:d0122be628. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE261
source / vignettesOK287
linux-release-x86_64NOTE240
macos-release-arm64NOTE216
macos-oldrel-arm64NOTE177
windows-develNOTE199
windows-releaseNOTE176
windows-oldrelNOTE186
wasm-releaseOK179

Exports:checkbox_labelsclean_REDCapcreate_projectcreate_project_addincreate_templatecreate_template_addinfactor_convertfactor_tablefct_case_wheninsert_calloutinsert_callout_2insert_margininsert_model_tabsetmake_column_dictmodify_labelspreprocess_qmdround_dfround_vecscale_colour_thekidsscale_fill_thekidsthekids_modelthekids_model_outputthekids_palthekids_savethekids_showpalettethekids_tablethekids_themetheme_thekidsupdate_columnsvariable_labelsyesno_vars

Dependencies:askpassbackportsbase64encbigDbitbit64bitopsblobbroombslibcachemcallrcardscardxcellrangerclicliprcommonmarkconflictedcpp11crayoncurldata.tableDBIdbplyrdigestdplyrdtplyrevaluateextrafontextrafontdbfarverfastmapflextablefontawesomefontBitstreamVerafontLiberationfontquiverforcatsfsgarglegdtoolsgenericsggfortifyggplot2gluegoogledrivegooglesheets4gridExtragtgtablegtsummaryhavenhighrhmshtmltoolshtmlwidgetshttpuvhttridsisobandjanitorjquerylibjsonlitejuicyjuiceknitrlabelinglabelledlaterlatticelifecyclelitedownlubridatemagrittrmarkdownMASSMatrixMatrixModelsmemoisemimemodelrnlmenumDerivofficeropensslordinalotelpatchworkpillarpkgconfigprettyunitsprocessxprogresspromisespspurrrquantregR6raggrappdirsRColorBrewerRcppreactablereactRreadrreadxlrematchrematch2reprexrlangrmarkdownrstudioapiRttf2pt1rvestS7sassscalesselectrshinyshinyFilesshinyjsshinyTreeshowtextshowtextdbsnakecasesourcetoolsSparseMstringistringrsurvivalsyssysfontssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbucminfutf8uuidV8vctrsviridisLitevroomwithrxfunxml2xtableyamlzip

The Kids Theming
Overview | The Kids Colours | Example Usage | > The Kids theming functions | > thekids_table | Table Highlighting | > highlight | > zebra
Rendered fromthekids_theming.Rmdusingknitr::rmarkdown

Last update: 2026-05-26
Started: 2025-04-02

Miscellaneous Functions
Overview | Example Usage | Using Extracts (> clean_REDCap) | Using APIs
Rendered frommiscellaneous.Rmdusingknitr::rmarkdown

Last update: 2026-05-06
Started: 2025-04-02

Cleaning Columns
Overview | 1. Create a data dictionary template: make_column_dict() | 2. Apply column dictionary: update_columns() | Writing/Loading column dictionaries from file
Rendered fromcleaning_columns.Rmdusingknitr::rmarkdown

Last update: 2026-02-06
Started: 2026-02-06

Project Workflows and Shiny Helpers/addins using thekidsbiostats
Overview | Organising Statistical Workflows | Step 1: Create folder structure | Step 2: Create (Quarto) markdown template | Enhancing Report Readability Using Add-Ins | Reproducibility Information
Rendered fromproject_workflow.Rmdusingknitr::rmarkdown

Last update: 2025-10-01
Started: 2025-04-02

Presenting Model Output
Overview | Example Usage | Data | Building the model | Model output | Descriptive statistics | Model diagnostics | Model effect | Interpretation of model
Rendered frommodel_output.Rmdusingknitr::rmarkdown

Last update: 2025-08-25
Started: 2025-04-02

Data Manipulation Tools
Overview | Example Usage | Rounding Functions | Data Manipulation Functions | > fct_case_when
Rendered fromdata_manipulations.Rmdusingknitr::rmarkdown

Last update: 2025-04-02
Started: 2025-04-02

Readme and manuals

Help Manual

Help pageTopics
checkbox_labelscheckbox_labels
clean_REDCapclean_REDCap
Create a new project structurecreate_project
Shiny Addin: Create New Projectcreate_project_addin
Create a Quarto report templatecreate_template
Shiny Addin: Create Report Templatecreate_template_addin
Example of a (fictional) uncleaned data set for analysisdata_patient
factor_convertfactor_convert
factor_tablefactor_table
fct_case_whenfct_case_when
Insert Callout via RStudio Addininsert_callout
Insert Callout via RStudio Addininsert_callout_2
Insert Margin Block at Cursorinsert_margin
RStudio Addin: Insert child Quarto tabset for model outputinsert_model_tabset
Image Size Parameters for Save Functionlayout_params
Create a copy-pasteable variable dictionary templatemake_column_dict
Modify flextable Labelsmodify_labels
Preprocess font changes to Quarto (.qmd) HTML reportspreprocess_qmd
round_dfround_df
round_vecround_vec
The Kids Colour Scales for ggplot2scale_color_thekids scale_colour_thekids scale_fill_thekids scale_thekids
The Kids Research Institute Australia Coloursthekids_colours
Fit a Statistical Model and Pass to Output Handlerthekids_model
Generate Model Output for Specified Model Typethekids_model_output
Generates a function, which when supplied to ggplot2 will return the appropriate colour palette, depending on the number of levels.thekids_pal
The Kids Research Institute Australia Colour Palettesthekids_palettes
Save a ggplot with common practical defaultsthekids_save
Function to display the available colours in The Kids palettethekids_showpalette
The Kids themed table outputthekids_table
Apply Institute Theming to ggplot2 Plotsthekids_theme theme_thekids
Apply a variable dictionary to a dataset. Each column is replaced with a new name and a corresponding label attribute is applied.update_columns
variable_labelsvariable_labels
yesno_varsyesno_vars